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Table 2 Select genes whose expression levels responded to short-term (30 min) perturbation with sodium chloride but not PEG8000 (FDR < 0.05, fold-difference > 2.0).

From: Transcriptome and membrane fatty acid analyses reveal different strategies for responding to permeating and non-permeating solutes in the bacterium Sphingomonas wittichii

Gene ID Gene Product Sodium chloride expression fold-change Regulation type
Swit_0142 phospholipase D 3.7 Up
Swit_0692 extracellular solute-binding protein 2.8 Up
Swit_1507 17 kDa surface antigen 17 Up
Swit_1509 17 kDa surface antigen 9.3 Up
Swit_2132 peptidoglycan-associated lipoprotein 2.0 up
Swit_2278 OmpA/MotB domain-containing protein 3.6 up
Swit_2322 OmpA/MotB domain-containing protein 10 up
Swit_2933 superoxide dismutase 2.3 up
Swit_3739 chloride channel, core 2.1 up
Swit_3836 ECF subfamily RNA polymerase sigma-24 factor 2.7 up
Swit_3837 putative transmembrane anti-sigma factor 2.5 up
Swit_3924 ECF subfamily RNA polymerase sigma-24 factor 7.2 up
Swit_3925 two-component response regulator 3.5 up
Swit_3926 signal transduction histidine kinase 3.0 up
Swit_0657 glutamate synthase (NADPH) large subunit 2.6 down
Swit_0958 butyryl-CoA:acetate CoA transferase 2.2 down
Swit_0959 3-oxoacid CoA-transferase, A subunit 2.1 down
Swit_2399 methionine synthase (B12-dependent) 2.8 down
Swit_2400 methionine synthase (B12-dependent) 3.0 down
Swit_2401 5,10-methylenetetrahydrofolate reductase 2.8 down
Swit_2559 acyl-CoA synthetase 7.7 down
Swit_2694 glycine cleavage system aminomethyltransferase T 2.0 down
Swit_2696 glycine dehydrogenase subunit 1 2.2 down
Swit_2697 glycine dehydrogenase subunit 2 2.0 down
Swit_3903 diacylglycerol kinase, catalytic region 5.4 down
Swit_3907 fatty acid hydroxylase 3.4 down
Swit_3986 Glu/Leu/Phe/Val dehydrogenase, dimerisation region 2.1 down
Swit_4784 glutamate synthase (NADPH) 2.3 down