Table 3 Newly Identified Genes Regulated by Fur That Contain a Predicted Fur Binding Site
Gene | Function | Fold Changea | Predicted Fur Binding Sequenceb |
|---|---|---|---|
rlgA | Putative resolvase | 2.8 | AAAATTAAAATCGTTGGC |
map c | Methionine aminopeptidase | 2.6 | AAATTGAGAATCATTCTG |
rpsB | 30S ribosomal subunit protein S2 | 4.0 | AAATTGAGAATCATTCTG |
yajC | Tranlocase protein, IISP family | 3.2 | GTAATGCAAAGCATAAAA |
nrdR c | Putative transcriptional regulator | 2.5 | GAAACGGTAAAAATTACC |
sucC | Succinyl-CoA synthetase, beta subunit | 4.1 | CTAAAGATAACGATTACC |
cmk | Cytidine monophosphate kinase | 2.7 | AAAAAGTAAATCATTGTC |
STM1013 | Gifsy-2 prophage, regulatory protein | 2.8 | AAAATCAAAATCAGTAAC |
STM1133 c | Putative dehydrogenase | -4.2 | ATAATGAGTAGAATTGTT |
nth c | Endonuclease III | 2.9 | GAAAAGCGTACCATTCCC |
ldhA c | Fermentative D-lactate dehydrogenase | -4.0 | AATATGCTTAAAATTATC |
ynaF c | Putative universal stress protein | -37.3 | GAAATAGATATAATTTAT |
hns | Histone like protein | 3.1 | ACAATGCTTATCATCACC |
STM1795 c | Homolog of glutamic dehydrogenase | 5.8 | AAAAAGATAAAAATAACC |
STM2186 | Putative glutamate synthase | -8.8 | AAATTGAGAATAGTTATT |
eutC c | Ethanolamine ammonia lyase | -4.1 | ATAATGCCCATCGTTTCC |
eutB c | Ethanolamine ammonia lyase | -3.2 | AAACTGATAAACATTGCC |
yffB c | Putative glutaredoxin | 2.6 | GAAATTCGAATAAATAAT |
iroN c | TonB-dependent siderophore receptor | 9.1 | CTAATGATAATAATTATC |
yggU c | Cytoplasmic protein | 3.5 | ATAACGCTAAGAATAAAC |
STM3600 c | Putative sugar kinase | -6.8 | CTGATGCTCATCATTATT |
STM3690 | Putative lipoprotein | -4.2 | ATAAACATTATAATTATA |
rpoZ c | RNA polymerase, omega subunit | 3.9 | AATAAGATAATCATATTC |
udp c | Uridine phosphorylase | -5.4 | CAATAAATAATCAATATC |
yjcD c | Putative xanthine/uracil permease | 2.8 | AAAAAGCAAACGATTATC |
dcuA | Anaerobic dicarboxylate transport protein | -5.8 | CAAATAACAACAATTTAA |