|
RT
|
Isolate namea
|
RFLP typeb
|
IIIB-specific PCRc
|
Alleles at the following loci
|
|---|
| | | | |
recA
|
gyrB
|
fliC
|
cepIR
|
dsbA
|
|---|
|
Group 1
| | | | | | | | |
|
74
|
MDII-143p
|
I
|
+
|
9
|
10
|
2
|
4
|
1
|
|
112
|
MDII-151p
|
I
|
+
|
9
|
8
|
2
|
4
|
1
|
|
Group 2
| | | | | | | | |
|
100
|
MDIII-B604
|
I
|
+
|
9
|
9
|
4
|
4
|
1
|
|
17
|
MexII-968
|
I
|
+
|
9
|
9
|
1
|
4
|
1
|
|
Group 3 (RT-4-complex)
| | | | | | | |
|
115
|
MDIII-B752
|
J'
|
+
|
10
|
9
|
2
|
7
|
1
|
|
21
|
MDIII-P378
|
J'
|
+
|
10
|
4
|
2
|
1
|
1
|
|
21
|
MexII-864
|
J'
|
+
|
10
|
4
|
2
|
1
|
1
|
|
3
|
MexII-57
|
J'
|
+
|
10
|
10
|
2
|
1
|
2
|
|
7
|
MexII-60
|
J'
|
+
|
10
|
10
|
2
|
8
|
2
|
|
7
|
MexII-857
|
J'
|
+
|
10
|
10
|
2
|
8
|
2
|
|
6
|
MexII-815
|
J'
|
+
|
10
|
10
|
2
|
1
|
1
|
|
53
|
MexII-845
|
J'
|
+
|
10
|
8
|
1
|
1
|
1
|
|
31
|
MexII-940
|
J'
|
+
|
10
|
9
|
1
|
1
|
1
|
|
36
|
MexII-945
|
J'
|
+
|
10
|
4
|
2
|
6
|
1
|
|
4*
|
MexII-967
|
J'
|
+
|
10
|
9
|
2
|
1
|
1
|
|
67
|
MexII-974
|
J'
|
+
|
10
|
8
|
2
|
6
|
1
|
|
57
|
MexII-994
|
J'
|
+
|
10
|
8
|
2
|
1
|
2
|
|
Group 4
| | | | | | | | |
|
50
|
MexII-867
|
ukd
|
+
|
11
|
8
|
6
|
1
|
1
|
|
46
|
MexII-976
|
I
|
+
|
9
|
8
|
6
|
1
|
1
|
|
Singletons
| | | | | | | | |
|
80
|
MCII-168
|
J'
|
+
|
10
|
5
|
3
|
6
|
2
|
|
27
|
MDII-129r
|
I
|
+
|
9
|
4
|
2
|
6
|
2
|
|
75
|
MDIII-B250
|
J'
|
+
|
10
|
8
|
4
|
4
|
1
|
|
114
|
MDIII-B716
|
I
|
+
|
9
|
4
|
2
|
7
|
1
|
|
28
|
MDIII-P410
|
I
|
+
|
9
|
4
|
5
|
7
|
2
|
|
22
|
MDIII-P461
|
J'
|
+
|
10
|
4
|
2
|
7
|
2
|
|
29
|
MDIII-T228
|
I
|
+
|
9
|
4
|
4
|
1
|
1
|
|
103
|
MDIII-T521
|
J'
|
+
|
10
|
9
|
4
|
4
|
2
|
|
70
|
MexII-206
|
uke
|
+
|
13
|
10
|
5
|
7
|
2
|
|
47
|
MexII-264
|
J'
|
+
|
10
|
2
|
1
|
2
|
2
|
|
48
|
MexII-828
|
J'
|
+
|
10
|
2
|
2
|
4
|
1
|
|
33
|
MexII-863
|
J'
|
+
|
10
|
4
|
6
|
10
|
2
|
- * The asterisk denotes the ancestral clone of the clonal complex.
- aItalian isolates: MCII, MCIII, MVP-C1, MVP-C2, MDII, MDIII-B, MDIII-P, MDIII-T, followed by the number of isolate. Mexican isolates: MexII, followed by the number of isolate.
- brecA RFLP with HaeIII.
- cThe presence and absence of specific PCR amplification for B. cenocepacia IIIB is indicated by a signus "+" and "-", respectively.
- d, euk, unknown RFLP profiles: restriction profiles never recovered among BCC reference strains examined [56].
