Genome organization of epidemic Acinetobacter baumanniistrains

BMC Microbiology

Table 3 Distribution of genomic regions in non-baumannii Acinetobacter species

A.baumanniiGEIs	ORF contained	A.baylyiADP1	A.calcoaceticusRUH2202	A. haemolyticusATCC19194	A. johnsoniiSH046	A. juniiSH205	A. lwoffiiSH145	A. radioresistensSK82	Acinetobacter sp. ATCC27244	Acinetobacter sp. DR1	A. nosocomialisRUH2624	A. pittiiSH024
G13 (ST25)	[A to L]	-	C	HL	HL	AB	HL	-	EFG...HL	C	C	CDE HL
G14	[A to H]	[A to H]	[A to H]	-	-	-	-	-	[A to H]	[A to H]	[ ]	[A to H]
G18 (ST78)	[AB]	-	-	-	-	-	-	-	-	[AB	-	[AB
G20 (ST78)	[A to C]	[ ]	-	BC	-	-	-	-	[ ]	[A to C]	[ ]	[A to C]
G21 (ST25)	[A to E]	-	[ ]	-	-	-	-	-	-	[A to E]	[ ]	[A to E]
G23 (ST25)	[A to H]	-	[ ]	-	-	-	-	A to G	-	[A to H]	[A to H]	[A to H]
G29 (ST25)	[A to D]	-	-	-	-	-	-	-	-	[A to D]	[A to D]	[ ]
G33 (ST25)	[A to AF]	[A to AF] ^#	-	-	-	-	-	-	-	[A to AF] ^#	-	-
G35 (abc)	[A to N]	-	-	-	-	-	-	-	-	[novel GEI]	-	C, N
G36	[A to I]	-	[A to I] ^#	-	-	-	-	-	-	[A to I] ^#	[A to F	[C to F
G37 (ST25)	[A to H]	-	-	B to E	-	-	-	-	-	[A to H] ^#	[ ]	[ ]
G37 (abc)	[A to G]	-	-	-	-	-	-	-	-	[A to G] ^#	[ ]	[A to G] ^#
G43 (ST25)	[A to V]	-	-	-	-	-	FG...H to V	FG...H to V	-	-	A to C	-
G44	[A to D]	-	[A to D]	-	-	-	-	-	-	[A to D	A to D	[A to D]
G46 (ST25)	[A to E]	CDE	CDE	-	-	-	-	-	-	CDE	[ ]	[ ]
G47 (abn, aby)	[A to R]	BL	-	L	-	BL	-	-	-	[B to R]	[B to R]	[B to R]
G51 (abc)	[A to G]	-	[A to G]	[A to G]	-	[A to G]	-	-	B to L	[A to G]	C	[A to G]
G57 (acb)	[A to H]	M to AG	-	-	-	[ ]	-	-	-	[ ]	[ ]	-

ORFs in each island are referrred to by capital letters. Brackets denote ORFs flanking genomic islands. Conserved genomic regions are highlighted in bold. Dots between letters denote that corresponding ORFs are not contiguous. #Genomic regions larger than those identified in A. baumannii.

ISSN: 1471-2180