Treated celiac disease (T-CD) children
|
1
|
3
|
3-IVb
|
Pediococcus pentosaceus (99%)
|
[GenBank:FJ844959.1]
|
|
1, 7
|
1-VII, 5-XI
|
Enterococcus faecium (99%)
|
[GenBank:FJ982664.1]
|
|
1
|
1-XII
|
Enterococcus avium (99%)
|
[GenBank:HQ169120.1]
|
|
1
|
1-20I
|
Lactobacillus plantarum (99%)
|
[GenBank:HQ441200.1]
|
|
1
|
1-7I
|
Lactobacillus delbrueckii subsp. bulgaricus (99%)
|
[GenBank:CP002341.1]
|
2
|
12
|
6-IV
|
Pediococcus pentosaceus (99%)
|
[GenBank:FJ844959.1]
|
3
|
2, 1, 1
|
2-XIV, 1-6I, 1-1I
|
Enterococcus faecium (99%)
|
[GenBank:HQ293070.1]
|
|
6
|
6-XVI
|
Enterococcus faecalis (99%)
|
[GenBank:HQ293064.1]
|
|
1
|
1-9I
|
Lactobacillus salivarius (99%)
|
[GenBank:GU357500.1]
|
4
|
1, 3, 2
|
1-II, 3-V, 2-VII
|
Enterococcus faecium (99%)
|
[GenBank:HQ293070.1]
|
|
3, 1, 1
|
3-II, 1-IV, 1-V
|
Enterococcus avium (99%)
|
[GenBank:HQ169120.1]
|
|
1
|
1-24I
|
Lactobacillus casei (99%)
|
[GenBank:HQ379174.1]
|
|
1
|
1-11I
|
Lactobacillus plantarum (99%)
|
[GenBank:EF439680.1]
|
5
|
5
|
5-VII
|
Enterococcus faecium (99%)
|
[GenBank:FJ982664.1]
|
|
1, 3
|
1-6I, 2-XIX
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
|
1
|
1-11I
|
Lactobacillus rhamnosus (99%)
|
[GenBank:HM218396.1]
|
|
1, 1
|
1-1I, 1-8I
|
Lactobacillus fermentum (99%)
|
[GenBank:HQ379178.1]
|
6
|
5
|
1(5I-11I-7I-12I-2I)
|
Enterococcus avium (99%)
|
[GenBank:HQ169120.1]
|
|
4
|
3-XXII
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
|
1, 1
|
1-1I, 1-3I
|
Lactobacillus plantarum (99%)
|
[GenBank:EF439680.1]
|
7
|
1
|
1-12I
|
Enterococcus avium (99%)
|
[GenBank:HQ169120.1]
|
|
11
|
4-XX
|
Streptococcus macedonicus (99%)
|
[GenBank:EU163501.1]
|
8
|
1
|
1-VII
|
Enterococcus faecium (99%)
|
[GenBank:HQ293070.1]
|
|
1
|
1-14I
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
|
4, 3, 1, 1, 1, 1
|
4-III, 3-IV, 1-6I, 1-12I, 1-14I, 1-15I
|
Lactobacillus salivarius (99%)
|
[GenBank:FJ378897.1]
|
9
|
2, 3
|
1-III,3-IV
|
Enterococcus faecalis (99%)
|
[GenBank:HQ293064.1]
|
|
1, 1, 1, 3, 1
|
10I, 1-V, 1-VI, 3-VII, 1-2I
|
Enterococcus faecium (99%)
|
[GenBank:HQ293070.1]
|
Treated celiac disease (T-CD) children
|
|
1
|
1-14Ib
|
Lactobacillus casei (99%)
|
[GenBank:HQ318715.2]
|
10
|
1
|
1-III
|
Enterococcus faecalis (99%)
|
[GenBank:HQ293064.1]
|
|
1
|
1-VII
|
Enterococcus durans (99%)
|
[GenBank:HM218637.1]
|
|
1
|
1-VII
|
Enterococcus faecium (99%)
|
[GenBank:HQ293070.1]
|
|
2
|
2-VIII
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
|
2, 1
|
2-III, 1-3I
|
Lactobacillus salivarius (99%)
|
[GenBank:FJ378897.1]
|
|
2
|
V
|
Lactobacillus coryniformis (99%)
|
[GenBank:HQ293050.1]
|
11
|
1, 1
|
1-4I, 1-12I
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
|
1
|
1-8I
|
Pediococcus acidilactici (99%)
|
[GenBank:GU904688.1]
|
|
1
|
1-11I
|
Enterococcus durans (99%)
|
[GenBank:HM218637.1]
|
|
2, 1, 3, 1, 1
|
2-I, 1-1I, 1(6I, 5I,7I), 1-3I, 1-2I
|
Enterococcus faecium (99%)
|
[GenBank:U385351.1]
|
12
|
10
|
5-IV
|
Pediococcus acidilactici (99%)
|
[GenBank:GU904688.1]
|
|
1
|
1-6I
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
13
|
1
|
3I
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
|
1, 7
|
1-VII, 3-XVIII
|
Enterococcus faecium (99%)
|
[GenBank:HQ293070.1]
|
14
|
8, 2
|
4-III, 2-IX
|
Enterococcus avium (99%)
|
[GenBank:HQ169120.1]
|
|
1
|
1-IV
|
Pediococcus acidilactici (99%)
|
[GenBank:GU904688.1]
|
|
2, 1, 1, 2
|
2-I, 1-22I, 1-III, 2-VI
|
Lactobacillus plantarum (99-100%)
|
[GenBank:HQ441200.1]
|
15
|
8, 1
|
8-IV, 1-2I
|
Pediococcus acidilactici (99%)
|
[GenBank:GU904688.1]
|
|
1
|
1-8I
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
|
1
|
1-XVIII
|
Enterococcus faecium (99%)
|
[GenBank:HQ293070.1]
|
|
1
|
1-III
|
Lactobacillus casei (99%)
|
[GenBank:HQ379174.1]
|
16
|
2
|
2-X
|
Enterococcus faecium (99%)
|
[GenBank:AB596997.1]
|
|
2, 8
|
2-XV, 7-XXI
|
Streptococcus pasteurianus (99%)
|
[GenBank:AB457024.1]
|
|
3
|
1(13I-14I-5I)
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
17
|
1
|
1-VI
|
Enterococcus faecium (99%)
|
[GenBank:AB596997.1]
|
|
8
|
7-XII
|
Enterococcus avium (99%)
|
[GenBank:HQ169120.1]
|
|
3, 1
|
2-XIII, 1-13I
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
18
|
6, 6
|
3-VI, 2-XVII
|
Enterococcus faecium (99%)
|
[GenBank:AB596997.1]
|
|
1
|
1-13I
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
|
3
|
3-II
|
Lactobacillus rhamnosus (99%)
|
[GenBank:HM218396.1]
|
Treated celiac disease (T-CD) children
|
|
1
|
1-14Ib
|
Lactobacillus casei (99%)
|
[GenBank:HQ318715.2]
|
19
|
1
|
1-VII
|
Enterococcus durans (99%)
|
[GenBank:HM218637.1]
|
|
6
|
5-III
|
Lactobacillus salivarius (99%)
|
[GenBank:FJ378897.1]
|
|
2
|
2-III
|
Lactobacillus paracasei (99%)
|
[GenBank:HQ423165.1]
|
|
1, 4, 1
|
24I, 3-III, 23I
|
Lactobacillus casei (99%)
|
[GenBank:HQ379174.1]
|
|
3
|
3-V
|
Lactobacillus coryniformis 99%)
|
[GenBank:HQ293050.1]
|
Heathy children (HC)
|
20
|
3
|
1-III
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
|
1, 6
|
1-2I, 3-VII
|
Enterococcus avium (99%)
|
[GenBank:HQ169120.1]
|
|
2
|
2-XIII
|
Enterococcus faecalis (99%)
|
[GenBank:HQ228219.1]
|
|
1
|
1-6I
|
Lactobacillus plantarum (99%)
|
[GenBank:EF439680.1]
|
21
|
3, 5
|
3-VI, 4-VII
|
Enterococcus avium (99%)
|
[GenBank:HQ169120.1]
|
|
2
|
2-XII
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
|
1, 1
|
1-3I, 1-XI
|
Lactobacillus plantarum (99%)
|
[GenBank:EF439680.1]
|
22
|
1, 1
|
1-III, 1-10I
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
|
4
|
3-VI
|
Enterococcus faecium(99%)
|
[GenBank:DQ305313.1]
|
|
5
|
5-VI
|
Enterococcus avium (99%)
|
[GenBank:HQ169120.1]
|
|
1
|
1-9I
|
Enterococcus durans (99%)
|
[GenBank:HM218738.1]
|
|
1
|
1-XI
|
Lactobacillus plantarum (99%)
|
[GenBank:EF439680.1]
|
|
1
|
1-11I
|
Lactobacillus mucosae (99%)
|
[GenBank:AB425938.1]
|
23
|
3
|
3-III
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
|
4
|
3-IV
|
Enterococcus durans (99%)
|
[GenBank:HM218637.1]
|
|
2
|
2-VI
|
Enterococcus faecium(99%)
|
[GenBank:FJ982664.1]
|
|
3, 2
|
3-VI, 2-VII
|
Enterococcus avium (99%)
|
[GenBank:HQ169120.1]
|
24
|
1, 1
|
1-5I, 1-8I
|
Enterococcus faecalis (99%)
|
[GenBank:HM480367.1]
|
|
1, 1, 1, 1, 1
|
1-9I, 1-4I, 1-XVI, 1-7I, 1-1I
|
Enterococcus faecium (99%)
|
[GenBank:HQ293070.1]
|
|
1, 1
|
1-XVI, 1-3I
|
Enterococcus durans (99%)
|
[GenBank:HM218637.1]
|
|
1
|
1-2I
|
Lactobacillus plantarum (99%)
|
[GenBank:EF439680.1]
|
25
|
3, 1, 1, 1
|
2-III, 1-V, 1-XIV, 1-2I
|
Enterococcus sp. (99%)
|
[GenBank:DQ305313.1]
|
|
1
|
1-VIII
|
Enterococcus faecium (99%)
|
[GenBank:AB596997.1]
|
Heathy children (HC)
|
|
1
|
1-IIIb
|
Lactobacillus casei (99%)
|
[GenBank:HQ379174.1]
|
|
3, 1
|
3-III, 1-XI
|
Lactobacillus plantarum (99%)
|
[GenBank:EF439680.1]
|
26
|
4
|
3-IX
|
Enterococcus sp. (99%)
|
[GenBank:DQ305313.1]
|
|
2, 1
|
2-XI, 1-11I
|
Enterococcus faecium (99%)
|
[GenBank:FJ982664.1]
|
|
1
|
1-7I
|
Lactobacillus plantarum (99%)
|
[GenBank:HQ441200.1]
|
|
1, 2, 1, 1, 1
|
1-13I, 2-VI, 1-8I, 1-2I, 1-7I
|
Lactobacillus casei (99%)
|
[GenBank:HQ379174.1]
|
27
|
2, 1, 1
|
1(3I-13I), 1-1I, 1-6I
|
Enterococcus sp. (99%)
|
[GenBank:DQ305313.1]
|
|
1, 1, 1, 2
|
1-5I, 1-2I, 1-7I, 2-XVI
|
Enterococcus faecium (99%)
|
[GenBank:AB596997.1]
|
|
3
|
2-XV
|
Enterococcus durans (99%)
|
[GenBank:HM209741.1]
|
|
1
|
1-11I
|
Lactobacillus plantarum (99%)
|
[GenBank:EF439680.1]
|
28
|
4, 1
|
4-VIII, 1-1I
|
Enterococcus faecium (99%)
|
[GenBank:AB596997.1]
|
|
1, 1, 2
|
1(4I-5I), 2-XIV
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
|
3
|
2-I
|
Lactobacillus plantarum (99%)
|
[GenBank:HQ441200.1]
|
|
3
|
3-II
|
Lactobacillus rhamnosus (99%)
|
[GenBank:HM218396.1]
|
|
1
|
1-4I
|
Lactobacillus brevis (99%)
|
[GenBank:HQ293087.1]
|
29
|
1, 1, 1
|
12I, 1(10I-11I), 1-1I
|
Enterococcus sp. (99-100%)
|
[GenBank:AB470317.1]
|
|
5, 1, 1
|
3-II, 1-IV, 1-V
|
Enterococcus durans (99%)
|
[GenBank:HM218637.1]
|
30
|
9, 1
|
5-XVIII, 1-1I
|
Enterococcus faecium (99%)
|
[GenBank:HQ293070.1]
|
|
1
|
IV
|
Lactobacillus casei (99%)
|
[GenBank:HQ379174.1]
|
|
1, 1, 2
|
1-4I, 1-13I, 2-XIII
|
Lactobacillus plantarum (99%)
|
[GenBank:EF439680.1]
|
31
|
1
|
1-1I
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
|
1
|
1-3I
|
Enterococcus faecium (99%)
|
[GenBank:HQ293070.1]
|
|
2, 2, 1, 2, 1, 2
|
2-V, 2-VII, 1-12I, 2-X, 1-4I, 2-XII
|
Lactobacillus plantarum (99%)
|
[GenBank:HQ441200.1]
|
|
1
|
1-VIII
|
Lactobacillus pentosus (99%)
|
[GenBank:HM067026.1]
|
32
|
11
|
2-I
|
Enterococcus faecium (99%)
|
[GenBank:B470317.1]
|
|
1, 1, 1
|
1-III, 1-15I, I-12I
|
Lactobacillus casei (99%)
|
[GenBank:HQ379174.1]
|
33
|
6
|
2-X
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
|
3, 1, 1, 2
|
3-III, 1-VII, 1-VIII, 2-IX
|
Lactobacillus plantarum (99%)
|
[GenBank:HQ441200.1]
|
Heathy children (HC)
|
34
|
1
|
1-4Ib
|
Enterococcus sp. (99%)
|
[GenBank:AB470317.1]
|
|
1
|
1-II
|
Lactobacillus rhamnosus (99%)
|
[GenBank:HM218396.1]
|
|
2
|
1-IV
|
Lactobacillus casei (99%)
|
[GenBank:HQ379174.1]
|
|
6
|
2-XI
|
Lactobacillus plantarum (99%)
|
[GenBank:HQ441200.1]
|