From: Characterization of pyoverdine and achromobactin in Pseudomonas syringae pv. phaseolicola 1448a
A domain | 8 residue signature alignment | Identity of best match | TSVM prediction congruent? |
---|---|---|---|
1923 | DGEDHGTV | | |:| DAESIGSV | BacB-M1-Lys bacitracin synthetase 2 | No: val = leu = ile = abu = iva-like specificity |
1924 mod1 | DLTKIGHV ||||:||: DLTKVGHI | SrfAB-M2-Asp surfactin synthetase B | Yes: asp = asn = glu = gln = aad-like specificity |
1924 mod2 | DFWNIGMV |||||||| DFWNIGMV | PvdD-M2-Thr pyoverdine synthetase | Yes: thr = dht-like specificity |
1925 mod1 | DFWNIGMV |||||||| DFWNIGMV | PvdD-M2-Thr pyoverdine synthetase | Yes: thr = dht-like specificity |
1925mod2 | DVWHVSLI |||||||| DVWHVSLI | PvdJ-M1-Ser pyoverdine synthetase | Yes: ser-like specificity |
1926 mod1 | DLTKIGHV ||||:||: DLTKVGHI | SrfAB-M2-Asp surfactin synthetase B | Yes: asp = asn = glu = gln = aad-like specificity |
1926 mod2 | DVWHVSLI |||||||| DVWHVSLI | PvdJ-M1-Ser pyoverdine synthetase | Yes: ser-like specificity |