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Table 2 In silico prediction of A-domain specificity for Ps1448a pyoverdine side chain NRPS

From: Characterization of pyoverdine and achromobactin in Pseudomonas syringae pv. phaseolicola 1448a

A domain 8 residue signature alignment Identity of best match TSVM prediction congruent?
1923 DGEDHGTV
| | |:|
DAESIGSV
BacB-M1-Lys bacitracin synthetase 2 No: val = leu = ile = abu = iva-like specificity
1924 mod1 DLTKIGHV
||||:||:
DLTKVGHI
SrfAB-M2-Asp surfactin synthetase B Yes:
asp = asn = glu = gln = aad-like specificity
1924 mod2 DFWNIGMV
||||||||
DFWNIGMV
PvdD-M2-Thr
pyoverdine synthetase
Yes:
thr = dht-like specificity
1925 mod1 DFWNIGMV
||||||||
DFWNIGMV
PvdD-M2-Thr
pyoverdine synthetase
Yes:
thr = dht-like specificity
1925mod2 DVWHVSLI
||||||||
DVWHVSLI
PvdJ-M1-Ser pyoverdine synthetase Yes:
ser-like specificity
1926 mod1 DLTKIGHV
||||:||:
DLTKVGHI
SrfAB-M2-Asp surfactin synthetase B Yes:
asp = asn = glu = gln = aad-like specificity
1926 mod2 DVWHVSLI
||||||||
DVWHVSLI
PvdJ-M1-Ser pyoverdine synthetase Yes:
ser-like specificity