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Table 2 Oligonucleotide sequences used to amplify C-prM gene junction of dengue virus.

From: Serotype and genotype analysis of dengue virus by sequencing followed by phylogenetic analysis using samples from three mini outbreaks-2007-2009 in Pakistan

Sr. No.

Primer Name

5'-3' Sequence

Size of amplified product in base pairs

1

D1-D

TCAATATGCTGAAACGCGWGAGAAACCG

511 bp

2

D2-D

TTGCACCARCARTCWATGTCTTCWGGYTC

 

3

TS1-F

AGGACCCATGAAATTGGTGA

411 bp

4

TS1-R

ACGTCATCTGGTTCCGTCTC

 

5

TS2-F

AGAGAAACCGCGTGTCAACT

403 bp

6

TS2-R

ATGGCCATGAGGGTACACAT

 

7

TS3-F

ACCGTGTGTCAACTGGATCA

453 bp

8

TS3-R

CAGTAATGAGGGGGCATTTG

 

9

TS4-F

CCTCAAGGGTTGGTGAAGAG

401 bp

10

TS4-R

CCTCACACATTTCACCCAAGT

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