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Table 3 Amino acid identities of capsid proteins of PCV2 strains

From: Identification of one critical amino acid that determines a conformational neutralizing epitope in the capsid protein of porcine circovirus type 2

Strain

PCV2a/CL

PCV2a/LG

PCV2a/JF2

PCV2b/YJ

PCV2b/SH

PCV2b/JF

PCV2a/CL

100

95.7

96.6

88.0

88.5

88.9

PCV2a/LG

 

100

97.9

88.9

89.3

89.7

PCV2a/JF2

  

100

89.0

89.7

90.2

PCV2b/YJ

   

100

96.6

97.0

PCV2b/SH

    

100

97.4

PCV2b/JF

     

100

  1. The percentage amino acid identities given are the result of pairwise alignments of the capsid proteins. Percentage identities between the PCV2a strains are shown in bold; percentage identities between the PCV2b strains are shown in bold and italics; percentage identities between the PCV2a and 2b strains are underlined.