Before Inoculation
|
---|
| | | |
Mean SD
|
---|
Location
|
Cage
|
n
|
T-RF
|
Conventional
|
Furnished
|
Aviary
|
---|
Ileum
|
Conventional
|
4
|
10.5 ± 1.7
|
70.5 ± 12.4
|
-
|
-
|
|
Furnished
|
4
|
6.5 ± 2.7
|
67.4 ± 9.9
|
65.9 ± 7.5
|
-
|
|
Aviary
|
4
|
7.3 ± 3.5
|
54.3 ± 9.6
|
66.8 ± 11.4
|
72.3 ± 7.0
|
Caecum
|
Conventional
|
4
|
39.5 ± 6.6
|
66.4 ± 6.0
|
-
|
-
|
|
Furnished
|
4
|
39.8 ± 4.2
|
60.8 ± 3.5
|
75.1 ± 6.0
|
-
|
|
Aviary
|
4
|
52.7 ± 23.5
|
38.6 ± 6.3
|
38.5 ± 4.8
|
45.4 ± 14.5
|
Four weeks PI
|
| | | |
Mean SD
|
Location
|
Cage
|
n
|
T-RF
|
Conventional
|
Furnished
|
Aviary
|
Ileum
|
Conventional
|
8
|
10.0 ± 1.2
|
86.5 ± 10.1
|
-
|
-
|
|
Furnished
|
8
|
6.9 ± 2.2
|
65.5 ± 9.3
|
81.1 ± 6.9
|
-
|
|
Aviary
|
7
|
10.7 ± 2.7
|
66.8 ± 9.2
|
67.5 ± 9.2
|
73.8 ± 9.0
|
Caecum
|
Conventional
|
8
|
58.0 ± 5.2
|
73.4 ± 5.8
|
-
|
-
|
|
Furnished
|
8
|
51.3 ± 7.3
|
57.7 ± 8.1
|
67.1 ± 8.6
|
-
|
|
Aviary
|
8
|
63.6 ± 5.3
|
54.6 ± 4.7
|
58.2 ± 4.9
|
74.2 ± 4.9
|
- n: number of samples
- SD: Dice similarity coefficient
- T-RF: Terminal Restriction Fragments