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Table 3 Results from BLAST analysis of sequenced DGGE bands.

From: A simplified and cost-effective enrichment protocol for the isolation of Campylobacter spp. from retail broiler meat without microaerobic incubation

Marker Band ID BLAST nearest homology
(GenBank accession number)
% Identity
A K 1 Acinetobacter sp. (FN563421) 96
B K 2 Uncultured Myxococcales bacterium (FJ435015) 93
C K 3 Lactobacillus sp. L21 (AF159000) 87
D K 4 Lactobacillus sp. (FJ971864) 95
E K 5 Lactobacillus sp. JN4 (AF157041) 90
Microaerobic subsamplea Campylobacter jejuni (GQ479820) 98
   Lactobacillus sp. 30A (FJ971864) 98
   Pseudomonas sp. CB10 (EU482914) 98
   Pseudomonas sp. R-35702 (AM886093) 97
Aerobic subsamplea Campylobacter jejuni (GQ479820) 98
   Lactobacillus sp. JN4 (AF157041) 83
   Pseudomonas sp. CB11 (EU482915) 98
   Uncultured bacterium clone FF_e08 (EU469596)  
  1. Marker bands were used in all the gels.
  2. a Unique DGGE bands from each subsample.