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Table 4 Genes containing the direct repeat sequence with no more than one mismatch

From: Role of the SaeRS two-component regulatory system in Staphylococcus epidermidisautolysis and biofilm formation

Gene IDa Name Startb Sequencec Endb Product
SERP0164   -1 GTTAAATTTAATTTAA -16 ATP:guanido phosphotransferase family protein
SERP0365 saeR -488 GTTAAATCATATTTAA -503 DNA-binding response regulator SaeR
SERP0371   -575 GTTAATCTTCATTTAA -590 exsD protein
SERP0721 pheS -648 GATAACATGATGTTAA -663 phenylalanyl-tRNA synthetase, alpha subunit
SERP1745 deoC -1091 GTAAAAATAAAGTTAA -1106 deoxyribose-phosphate aldolase
SERP2192 cysH -172 GATAATCAAAAGTTAA -187 phosophoadenylyl-sulfate reductase
SERP2360   -114 GTTAAACCACCGTCAA -129 3-hydroxyacyl-CoA dehydrogenase family protein
SERP2414   -270 GTTAACAGATAGTAAA -285 lipoprotein, putative
  1. a These genes are identified in microarray analysis.
  2. b The start point and end point are the distance from the translation start codon.
  3. c Conserved repeat sequences are underlined.