Table 1 Distribution of sGCSs in different phyla.
Taxon | Phylum | # of chromosomes | # of sGCSs | Percentage of sGCSs # < = 8 | Average GC+/- SD (%)* | Average Length +/- SD (kb)$ | ||
|---|---|---|---|---|---|---|---|---|
| Â | Â | Â | 2 | 4-8 | > = 10 | Â | Â | Â |
Archaea | Crenarchaeota | 23 | 0 | 5 | 18 | 21.74% | 44.39 +/- 9.66 | 2188.85 +/- 506.62 |
| Â | Euryarchaeota | 57 | 7 | 13 | 37 | 35.09% | 46.31 +/- 12.66 | 2211.67 +/- 1034.73 |
| Â | Korarchaeota | 1 | 0 | 0 | 1 | 0.00% | 49.75 +/- 0.00 | 1590.76 +/- 0.00 |
| Â | Nanoarchaeota | 1 | 0 | 1 | 0 | 100.00% | 31.60 +/- 0.00 | 490.88 +/- 0.00 |
| Â | Thaumarchaeota | 1 | 0 | 0 | 1 | 0.00% | 33.90 +/- 0.00 | 1645.26 +/- 0.00 |
Bacteria | Acidobacteria | 3 | 0 | 0 | 3 | 0.00% | 60.13 +/- 1.64 | 6581.12 +/- 3028.39 |
| Â | Actinobacteria | 92 | 20 | 23 | 49 | 46.74% | 65.08 +/- 7.01 | 4563.76 +/- 2248.12 |
| Â | Aquificae | 7 | 0 | 1 | 6 | 14.29% | 38.82 +/- 5.91 | 1680.59 +/- 161.52 |
| Â | Bacteroidetes | 29 | 14 | 14 | 1 | 96.55% | 41.95 +/- 11.91 | 3653.46 +/- 2340.45 |
| Â | Chlamydiae | 15 | 14 | 1 | 0 | 100.00% | 40.25 +/- 1.67 | 1209.16 +/- 343.03 |
| Â | Chlorobi | 11 | 8 | 3 | 0 | 100.00% | 50.64 +/- 4.40 | 2618.73 +/- 417.30 |
| Â | Chloroflexi | 14 | 5 | 4 | 5 | 64.29% | 55.78 +/- 7.93 | 3290.10 +/- 2063.61 |
| Â | Cyanobacteria | 41 | 9 | 14 | 18 | 56.10% | 44.76 +/- 10.19 | 3185.53 +/- 2028.34 |
| Â | Deferribacteres | 2 | 2 | 0 | 0 | 100.00% | 36.87 +/- 8.07 | 2728.23 +/- 698.40 |
| Â | Deinococcus-Thermus | 7 | 3 | 3 | 1 | 85.71% | 66.54 +/- 2.43 | 2170.02 +/- 900.69 |
| Â | Dictyoglomi | 2 | 2 | 0 | 0 | 100.00% | 34.66 +/- 0.02 | 1907.77 +/- 73.84 |
| Â | Elusimicrobia | 2 | 2 | 0 | 0 | 100.00% | 38.13 +/- 2.96 | 1384.71 +/- 366.07 |
| Â | Fibrobacteres | 1 | 1 | 0 | 0 | 100.00% | 47.74 +/- 0.00 | 3842.64 +/- 0.00 |
| Â | Firmicutes | 200 | 198 | 2 | 0 | 100.00% | 38.54 +/- 6.93 | 3081.76 +/- 1184.70 |
| Â | Fusobacteria | 4 | 2 | 2 | 0 | 100.00% | 28.83 +/- 3.56 | 2680.38 +/- 1205.57 |
| Â | Gemmatimonadetes | 1 | 0 | 1 | 0 | 100.00% | 64.17 +/- 0.00 | 4636.96 +/- 0.00 |
| Â | Nitrospirae | 1 | 0 | 0 | 1 | 0.00% | 33.91 +/- 0.00 | 2003.80 +/- 0.00 |
| Â | Planctomycetes | 2 | 1 | 1 | 0 | 100.00% | 56.21 +/- 1.74 | 6670.89 +/- 671.31 |
| Â | Proteobacteria | 586 | 369 | 155 | 62 | 89.42% | 53.12 +/- 12.12 | 3516.36 +/- 1661.41 |
| Â | Spirochaetes | 24 | 21 | 3 | 0 | 100.00% | 35.65 +/- 7.38 | 1680.71 +/- 1445.58 |
| Â | Synergistetes | 2 | 2 | 0 | 0 | 100.00% | 54.16 +/- 12.43 | 1914.53 +/- 93.42 |
| Â | Tenericutes | 27 | 12 | 15 | 0 | 100.00% | 27.98 +/- 3.40 | 892.61 +/- 204.62 |
| Â | Thermobaculum | 2 | 1 | 1 | 0 | 100.00% | 56.02 +/- 11.51 | 1550.79 +/- 673.39 |
| Â | Thermotogae | 11 | 0 | 6 | 5 | 54.55% | 40.19 +/- 6.51 | 1976.74 +/- 160.46 |
| Â | Verrucomicrobia | 4 | 3 | 1 | 0 | 100.00% | 55.24 +/- 8.47 | 3664.91 +/- 1649.61 |
Total | Â | 1173 | 696 | 269 | 208 | 82.27% | Â | Â |