From: Proteomic analysis of the carotenogenic yeast Xanthophyllomyces dendrorhous
cNormalized average spot quantity | dFold change | ||||||||
---|---|---|---|---|---|---|---|---|---|
aSSP | bDescription | Lag | Exponential | Stationary | E/L | S/L | |||
Avg. | SD | Avg. | SD | Avg. | SD | ||||
Cellular Processes: Transport and motor proteins | |||||||||
6818 | Putative coatomer subunit alpha | 144 | 111 | 813 | 345 | 1195 | 155 | 5.64 | 8.30 |
8703 | Myosin-associated protein | 152 | 151 | 995 | 598 | 735 | 255 | 6.56 | 4.84 |
8711 | 623 | 441 | 3145 | 2255 | 2459 | 906 | 5.05 | 3.95 | |
5719 | Golgi transport protein | 7637 | 435 | 2446 | 1101 | 7415 | 1660 | -3.12 | -1.03 |
5728 | 4330 | 676 | 1390 | 618 | 3494 | 1095 | -3.12 | -1.24 | |
6703 | 9226 | 2086 | 4269 | 306 | 7877 | 3334 | -2.16 | -1.17 | |
2712 | SS1G_01912 | 13322 | 4086 | 3886 | 2574 | 5444 | 711 | -3.43 | -2.45 |
7403 | KIP1 kinesin-related protein | 1494 | 866 | 5246 | 2780 | 3349 | 528 | 3.51 | 2.24 |
7804 | Vacuolar-sorting-associated protein 25 | 3952 | 977 | 11351 | 6299 | 3428 | 1137 | 3.57 | 5.03 |
Environmental Information Processing: Signal Transduction | |||||||||
3814 | Serine/threonine-prot. phosphatase PP1-1 | 472 | 451 | 270 | 108 | 2273 | 1825 | -1.75 | 4.81 |
3815 | 14950 | 1985 | 7701 | 6806 | 10797 | 2018 | -5.54 | 1.66 | |
3816 | 208 | 94 | 133 | 103 | 745 | 415 | -1.57 | 3.57 | |
5724 | Nucleotide phosphodiesterase | 356 | 91 | 966 | 339 | 607 | 196 | 2.72 | 1.71 |
0126 | 14-3-3. DNA damage checkpoint protein | 636 | 515 | 98 | 102 | 2338 | 2264 | -6.49 | 3.68 |
0127 | 261 | 327 | 236 | 252 | 3161 | 937 | -1.11 | 12.09 | |
0128 | 85 | 79 | 253 | 101 | 904 | 339 | 2.98 | 10.64 | |
Genetic Information Processing | |||||||||
9206 | Ribosomal_L15 | 19280 | 5898 | 6131 | 5697 | 9959 | 8398 | -3.14 | -1.94 |
7815 | Mediator of RNA polymerase II | 1436 | 1029 | 2487 | 788 | 3794 | 542 | 1.73 | 2.64 |
6707 | Hypothetical protein. DNA helicase | 1663 | 234 | 785 | 319 | 2342 | 1310 | -2.12 | 1.25 |
6610 | Replication factor C subunit 3 | 1663 | 234 | 785 | 319 | 2342 | 1310 | -2.12 | 1.41 |
3228 | G4P04 (Fragment) | 12049 | 2891 | 7896 | 4292 | 2188 | 1579 | -1.53 | -5.51 |
4803 | Calpain-like protease palB/RIM13 | 1155 | 494 | 1308 | 890 | 347 | 171 | 1.13 | -3.33 |
2072 | 391 | 2087 | 1350 | 1715 | 101 | 1.01 | -1.21 | ||
7528 | Serine/threonine protein kinase (Kin28) | 1366 | 369 | 2405 | 840 | 3280 | 802 | 1.76 | 2.40 |
7515 | Histone acetyltransferase, predicted | 3162 | 819 | 10965 | 2273 | 9410 | 1514 | 3.47 | 2.98 |
7711 | Cell division control protein 25, putative | 957 | 73 | 2201 | 1398 | 2842 | 659 | 2.30 | 2.97 |
Metabolism | |||||||||
7407 | UDP-xylose synthase | 5850 | 468 | 6499 | 2421 | 12649 | 295 | 1.11 | 2.16 |
8507 | ATP synthase subunit alpha | 13682 | 2423 | 11233 | 8105 | 4099 | 3058 | -1.22 | -3.34 |
7801 | Heat shock protein, putative | 1059 | 268 | 4202 | 2317 | 2373 | 708 | 3.97 | 2.24 |
Lipid and Carbohydrate Metabolism | |||||||||
2523 | Acetyl-CoA carboxylase | 10538 | 888 | 5524 | 2209 | 10218 | 5489 | -1.91 | -1.03 |
2524 | 26474 | 7704 | 15933 | 13733 | 17308 | 4885 | -1.66 | -1.53 | |
3516 | 38053 | 5148 | 12837 | 8209 | 26762 | 5654 | -2.96 | -1.42 | |
7519 | Phosphoglucomutase-1 | 1967 | 565 | 6358 | 1401 | 2562 | 632 | 3.23 | 1.30 |
2319 | Acetyl-CoA synthetase | 14327 | 8064 | 11303 | 10213 | 4218 | 576 | -1.27 | -3.40 |
4104 | ATP-citrate synthase | 18720 | 2582 | 14847 | 10388 | 11099 | 2402 | -1.26 | -1.69 |
4413 | ATP-citrate lyase | 9657 | 987 | 6925 | 7702 | 8736 | 2536 | -1.39 | -1.11 |
6604 | Fatty acid synthase | 1291 | 149 | 285 | 315 | 1978 | 483 | -4.52 | 1.53 |
Secondary Metabolite/ Carotenoid Biosynthesis | |||||||||
4515 | Phytoene/squalene synthetase | 5412 | 2656 | 13551 | 3057 | 7789 | 1051 | 2.50 | 1.44 |
4609 | Mevalonate kinase | 425 | 96 | 283 | 243 | 1246 | 454 | -1.50 | 2.93 |
3517 | Phosphomevalonate kinase | 1005 | 494 | 270 | 220 | 367 | 504 | -3.72 | -2.73 |
6308 | Diphosphomevalonate decarboxylase | 2146 | 1521 | 4628 | 2509 | 5598 | 1347 | 2.16 | 2.61 |
Redox Metabolism | |||||||||
4401 | Hypothetical oxidoreductase | 6305 | 1432 | 1034 | 1014 | 1432 | 561 | -6.10 | -4.40 |
3606 | Putative protein Cu-oxidase | 741 | 92 | 184 | 195 | 1198 | 691 | -4.04 | 1.62 |
5202 | SDR family | 2593 | 668 | 342 | 91 | 3515 | 418 | -7.59 | 1.36 |
5208 | Alcohol dehydrogenase | 2564 | 1239 | 1008 | 1032 | 1607 | 578 | -2.54 | -1.60 |
4713 | Monooxygenase | 3930 | 522 | 4267 | 1706 | 5044 | 500 | 1.09 | 1.28 |
5703 | 4713 | 612 | 6594 | 2637 | 8287 | 916 | 1.40 | 1.76 | |
5315 | Cytochrome P450 | 10876 | 4259 | 16346 | 15386 | 6649 | 4692 | 1.50 | -1.64 |
7108 | Mn SOD | 12020 | 3850 | 18262 | 13048 | 11032 | 1547 | 1.52 | -1.09 |
Amino Acid Metabolism | |||||||||
8604 | Seryl-tRNA synthetase | 783 | 87 | 2517 | 1567 | 3861 | 203 | 3.21 | 4.93 |
7209 | Methionyl-tRNA formyltransferase | 912 | 290 | 28686 | 4392 | 17584 | 6195 | 31.44 | 19.27 |
7210 | 4348 | 1880 | 15379 | 2474 | 9085 | 2322 | 3.54 | 2.09 | |
7816 | Kynurenine 3-monooxygenase | 111 | 73 | 726 | 424 | 811 | 64 | 6.56 | 7.33 |
7817 | 114 | 119 | 1139 | 751 | 1367 | 206 | 10.02 | 12.03 | |
7819 | 130 | 84 | 1625 | 1134 | 1797 | 821 | 12.50 | 13.82 | |
6821 | Aspartyl-tRNA synthetase | 156 | 81 | 395 | 76 | 1532 | 796 | 2.54 | 9.84 |
6828 | 580 | 11 | 2001 | 1020 | 2199 | 706 | 3.45 | 3.79 | |
5410 | Probable acetylornithine aminotransferase | 4766 | 986 | 1794 | 1531 | 2615 | 447 | -2.66 | -1.82 |
2517 | Phenylalanyl-tRNA synthetase beta chain | 3325 | 375 | 813 | 639 | 2104 | 1397 | -4.09 | -1.58 |
5409 | Glutamate dehydrogenase | 2194 | 1506 | 2738 | 930 | 6893 | 2363 | 1.25 | 3.14 |
Unknown | |||||||||
2709 | Conserved hypothetical protein | 5609 | 2745 | 1227 | 889 | 4692 | 657 | -4.57 | -1.20 |
2710 | 2584 | 1482 | 1157 | 1630 | 1465 | 1413 | -2.23 | -1.76 | |
6603 | Hypothetical protein | 3640 | 575 | 1014 | 1091 | 2985 | 120 | -3.59 | -1.22 |
7306 | Hypothetical protein | 2652 | 601 | 795 | 253 | 3569 | 2539 | -3.34 | 1.35 |
6110 | YALI0D17292p | 10346 | 2105 | 1204 | 1434 | 8343 | 763 | -8.59 | -1.24 |
3503 | Predicted protein | 2670 | 367 | 906 | 897 | 735 | 650 | -2.95 | -3.63 |