Table 2 Primers used to determine CTX prophage array structure
From: New V. choleraeatypical El Tor variant emerged during the 2006 epidemic outbreak in Angola
Primer | Nucleotide sequence (5' to 3') | Position (GenBank Accession no. NC_002505-6) |
|---|---|---|
tlcF | CCAAAACAACAGAAGCAACAGAGCAACG | 1574460-1574487 |
rstCF | GGCGCTTATACAGACGAAATCGCTC | 1564180-1564201 |
rstCR | AGCGCCTGAACGCAGATATAAA | 1564290-1564311 |
rstAR | CGACAAAAACAAACGGAGAAGCGT | 1572748-1572771 |
ctxAF | CTCAGACGGGATTTGTTAGGCACG | 1567895-1567918 |
rtxR | CAAGCTGCGATCAGCATGGCGTGGTC | 1563652-1563671 |
cepR | CAGTGTTTTGGTGACTTCCGT | 1571101-1571121 |
chr2F | CTCACGCTGAACAGCAAGTC | 507564-507583 |
chr2R | AAACCGGGAGAAGTGATTGC | 509487-509506 |