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Table 1 Data collection and structure refinement statistics

From: The crystal structure of alanine racemase from Streptococcus pneumoniae, a target for structure-based drug design

Data collection

   Unit cell parameters

   a = 119.97 Å, b = 119.97 Å, c = 118.10 Å

 

   α = 90°, β = 90°, γ = 120°

   Space group

   P3121

   λ (Å)

   1.5418

   Mosaicity

   0.48

   Observations

   475265

   Unique reflections

   66748

   R-mergea(%)

   8.3 (68.2)

   Completeness (%)

   99.6 (95.4)

   <I/σ>

   21.3 (1.7)

Refinement statistics

   Resolution (Å)

   23.03 - 2.00 (2.05 - 2.00)

   Reflections

   63336 (4412)

   Total atoms

   6161

   R-factorb (%)

   16.8 (32.2)

   Rfree (%)

   20.0 (35.5)

   Average B-factors (Å2)

 

Wilson B-factor

   33.2

All atoms

   42.7

Main chain atoms

   41.8

Side chain atoms and waters

   43.6

Waters

   44.5

   R.m.s. deviations

 

Bond lengths (Ã…)

   0.015

Bond angles (deg)

   1.45

   No. of residues

   734, 100%

   No. of protein atoms

   5615

   No. of PLP atoms

   30

   No. of benzoic acid atoms No. of water molecules

   9 507

Residues in the Ramachandran plot

 

   Most favored regions

   588, 92.7%

   Additionally allowed regions

   44, 6.9%

   Generously allowed regions

   2, 0.3%

   Disallowed regions

   0, 0%

  1. aR-merge = Σ|Iobs-Iavg|/Σ|Iavg|
  2. b R-factor = Σ|Fobs-Fcalc|/Σ|Fobs|
  3. Values in parenthesis are for the highest resolution shell.