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Table 4 In silico analysis of the available sequences of the genes detected in L. garvieae by CGH

From: Analysis of the genome content of Lactococcus garvieae by genomic interspecies microarray hybridization

Gene ID

GenBank accession number of L. garvieae sequence

L. garvieae strain

Similarity with S. pneumoniae TIGR4 gene (%)

Similarity with array probe (%)

SP1508

AX111128

from patent WO0123604

82

82

SP0896

AB024532

SA8201

80

79

SP0766

AM490328

JIP 31-90 (2)

71

79

 

AJ387925

CIP 102507 T

70

70

 

AJ387923

E. serolicida ATCC49156

70

70

SP04000

AB024531

SA8201

74

-

SP1489

AX109994

from patent WO0123604

80

79

SP1219

AB364641

20-92

84

86

 

AB364640

Lc.1236

84

85

 

AB364639

Lc. 925

85

85

 

AB364638

Lc. 881

84

84

 

AB364637

Lc. 337

85

85

 

AB364633

LMG9472

85

85

 

AB364632

ATCC43921

84

84

 

AB364627

G50202

84

84

 

AB364626

KGLA5224

84

84

 

AB364625

EH5803

83

83

 

AB364624

KG9408

84

84

  1. Results for the S. pneumoniae TIGR4 array based-CGH