From: The PTS transporters of Lactobacillus gasseri ATCC 33323
Amplified Region | ORF | Primer Sequence | Product Size (bp) |
---|---|---|---|
PFK | 881 | 5'-GTTATGGGTCGTGATGTG-3' (F) | 85 |
 |  | 5'-AAGGCTCTTCTGGGATAAC-3' (R) |  |
PTS 1 | 118 | 5'-TTGGACGTGGCTTAGTTC-3' (F) | 85 |
 |  | 5'-GCACCAGCTACTGTTAAACC-3' (R) |  |
PTS 3 | 149 | 5'-GATCAGGGCTAGTTGTTG-3' (F) | 96 |
 |  | 5'-CGGCAGCTAAATAACCAC-3' (R) |  |
PTS 5 | 195 | 5'-GAAGCCTGCGTAAATAAGC-3' (F) | 100 |
 |  | 5'-GTTGCCTGAACAAGTTCC-3' (R) |  |
PTS 6 | 343 | 5'-CGCAAATGGATACCATGAAAG-3' (F) | 77 |
 |  | 5'-TCCAGTAGTGGTAATCATACG-3' (R) |  |
PTS 7 | 398 | 5'-GGAATGATGGGAAAGGGAATAG-3' (F) | 99 |
 |  | 5'-TGCATGACCTGTTGGATAAG-3' (R) |  |
PTS 8 | 497 | 5'-AGCAACCCTATGACTACTACTC-3' (F) | 92 |
 |  | 5'-AGCCATGGTAAGCACTTATC-3' (R) |  |
PTS 9 | 501 | 5'-CAACTTGTGCGAAGAATTTAAC-3' (F) | 95 |
 |  | 5'-AATTTCAGCAGCTAAGATAACG-3' (R) |  |
PTS 10 | 515 | 5'-GCTCCAGCTTATGTCGTTAG-3' (F) | 109 |
 |  | 5'-AGAAGCACCAGTTCGAATAG-3' (R) |  |
PTS 11 | 535 | 5'-GCCAGCCGTTTATGGTATC-3' (F) | 82 |
 |  | 5'-AACAAGGCCACCAAATGC-3' (R) |  |
PTS 15 | 1669 | 5'-CTTCATTCCGATAGCATGTC-3' (F) | 100 |
 |  | 5'-TGAAGGAGTTGCTGTTGAG-3' (R) |  |
PTS 17 | 1688 | 5'-TCCAGGTGTCTTGAAAGTAG-3' (F) | 99 |
 |  | 5'-TCAGGGTGAGTGATAATGTC-3' (R) |  |
PTS 18 | 1726 | 5'-CCATACCACCTACCATAAACAG-3' (F) | 91 |
 |  | 5'-GCTTACGTCTTTGCTTCAG-3' (R) |  |
PTS 19 | 1755 | 5'-CAATCATTGCACCATACATAGG-3' (F) | 78 |
 |  | 5'-ATTTAGGCGGAATTACAGAAC-3' (R) |  |
PTS 20 | 1778 | 5'-GCGCTTACCGTATACAAAGG-3' (F) | 89 |
 |  | 5'-TGGTGCCAAAGAGTATTCC-3' (R) |  |
PTS 21 | 1794 | 5'-GCAGGAATGGCAAGTAATAAAC-3' (F) | 86 |
 |  | 5'-GCTATTGATCGTTGGCAAATG-3' (R) |  |
AF_1360Bam | 1360 | 5'-ATGCGGATCC-CGGCAGCCATAGTATATTG-3' (F) | 836 |
AF_1360Nco | Â | 5'-ATGCCCATGG-TCATGGCTCGTTCATTAG-3' (R) | Â |
AF_ori+ | -- | 5'-GATAATGAACTGTGCTGATTAC-3' (F) | 1071 |
AF_EI+ | Â | 5'-TGGGTTATATGGTTGGTAAAG-3' (R) | Â |
AF_ori- | -- | 5'-TTCAATCGCCAACGAATC-3' (F) | 1020 |
AF_EI- | Â | 5'-AGTGATACAGCTCAACTTAAC-3' (R) | Â |
MM_1669Bam | 1669 | 5'-AGTCGGATCCTGCAGCAGGTATGATTAAAG-3' (F) | 819 |
MM_1669Nco | Â | 5'-AGTCCCATGGAATAGCTGGTTCAGTAACAC-3' (R) | Â |
AF_ori+ | -- | 5'-GATAATGAACTGTGCTGATTAC-3' (F) | 999 |
MM_PTS15+ | Â | 5'-TGCTGATGACGATTTAGATG-3' (R) | Â |
AF ori- | -- | 5'-TTCAATCGCCAACGAATC-3' (F) | 1039 |
MM_PTS15- | Â | 5'-GCTGCAATACAACTTAAGAC-3' (R) | Â |
MM_1778Bam | 1778 | 5'-AGTCGGATCCCAGGTTTGTTTGGAGCAAAG' (F) | 760 |
MM_1778Nco | Â | 5'-AGTCCCATGGTGCTGGTTCAGTAATACCAAG-3' (R) | Â |
AF_ori+ | -- | 5'-GATAATGAACTGTGCTGATTAC-3' (F) | 894 |
MM_PTS20+ | Â | 5'-CTTAGTAGCTGGTGGTTTG-3' (R) | Â |
AF ori- | -- | 5'-TTCAATCGCCAACGAATC-3' (F) | 990 |
MM_PTS20- | Â | 5'-TACACCTGCACCAATTAAAG-3' (R) | Â |
MM_1795Bam | 1795 | 5'-AGTCGGATCCAAGGTCCTGATGATATTAGAG' (F) | 675 |
MM_1795Nco | Â | 5'-AGTCCCATGGATAGCTTTAAGCGCATCTTC-3' (R) | Â |
AF_ori+ | -- | 5'-GATAATGAACTGTGCTGATTAC-3' (F) | 854 |
MM_PTS21+ | Â | 5'-TAGTCACGGTGGCTTTG-3' (R) | Â |
AF ori- | -- | 5'-TTCAATCGCCAACGAATC-3' (F) | 895 |
MM_PTS21- | Â | 5'-CACTGTAAGCCATGGAAC-3' (R) | Â |