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Table 2 Non-Francisella organisms from the strain collection of the Bundeswehr Institute of Microbiology tested to assess the specificity of the FISH assay

From: Rapid differentiation of Francisella species and subspecies by fluorescent in situ hybridization targeting the 23S rRNA

Species

Strain designation

EUB388

NON-EUB338

Bwall1448

Acinetobacter baumannii

DSMZ 7324

+

-

-

Acinetobacter calcoaceticus

DSMZ 30006

+

-

-

Achromobacter ruhlandii

DSMZ 633

+

-

-

Achromobacter xylosoxidans subsp. denitrificans

DSMZ 30026

+

-

-

Aeromonas hydrophila

ATCC 7966

+

-

-

Alcaligenes faecalis subsp. feacalis

DSMZ 30030

+

-

-

Bacillus cereus

DSMZ 4222

+

-

-

Bacillus mycoides

DSMZ 2048

+

-

-

Bacillus stearothermophilus

DSMZ 5943

+

-

-

Bacillus subtilis

DSMZ 2109

+

-

-

Burkholderia cepacia

B46, clinical isolate (PI)

+

-

-

Burkholderia thailandensis

DSMZ 13276

+

-

-

Candida albicans

DSMZ 1386

+

-

-

Citrobacter freundii

DSMZ 30039

+

-

-

Citrobacter koseri

DSMZ 4595

+

-

-

Chromobacterium violaceum

LMG 1267

+

-

-

Clostridium difficile

DSMZ 1296

+

-

-

Eikenella corrodens

DSMZ 8340

+

-

-

Enterobacter aerogenes

DSMZ 12058

+

-

-

Enterobacter cloacae

ATCC 13047

+

-

-

Enterococcus faecalis

DSMZ 2570

+

-

-

Escherichia coli

ATCC 25922

+

-

-

Hämophilus influenzae

DSMZ 4690

+

-

-

Kingella denitrificans

DSMZ 10202

+

-

-

Kingella kingae

DSMZ 7536

+

-

-

Klebsiella pneumoniae

DSMZ 30104

+

-

-

Legionella pneumophila

DSMZ 1296

+

-

-

Listeria monocytogenes

DSMZ 12464

+

-

-

Moraxella catarrhalis

DSMZ 9143

+

-

-

Morganella morganii

DSMZ 6675

+

-

-

Neisseria meningitidis

DSMZ 10036

+

-

-

Ochrobactrum anthropi

DSMZ 7216

+

-

-

Pasteurella multocida

DSMZ 5281

+

-

-

Plesiomonas shigelloides

DSMZ 8224

+

-

-

Propionibacterium acnes

DSMZ 1897

+

-

-

Proteus mirabilis

DSMZ 4479

+

-

-

Proteus vulgaris

DSMZ 30118

+

-

-

Pseudomonas aeruginosa

DSMZ 11810

+

-

-

Pseudomonas putida

DSMZ 291

+

-

-

Pseudomonas stutzeri

NCTC 10450

+

-

-

Psychrobacter phenylpyruvicus

DSMZ 7000

+

-

-

Rahnella aquatilis

DSMZ 4549

+

-

-

Ralstonia pickettii

DSMZ 6297

+

-

-

Salmonella typhimurium

ATCC 13311

+

-

-

Salmonella urbana

HR

+

-

-

Serratia marcescens

DSMZ 30121

+

-

-

Serratia proteomaculans

DSMZ 4543

+

-

-

Shigella flexneri

DSMZ 4782

+

-

-

Sphingomonas paucimobilis

DSMZ 1098

+

-

-

Staphylococcus aureus

DSMZ 346

+

-

-

Staphylococcus epidermidis

DSMZ 1798

+

-

-

Staphylococcus hämolyticus

DSMZ 20228

+

-

-

Stenotrophomonas maltophilia

DSMZ 50170

+

-

-

Streptococcus agalactiae

DSMZ 2134

+

-

-

Streptococcus mitis

DSMZ 12643

+

-

-

Streptococcus pneumoniae

DSMZ 20566

+

-

-

Streptococcus pyogenes

DSMZ 20565

+

-

-

Vibrio cholerae

El Tor

+

-

-

Vibrio parahaemolyticus

DSMZ 10027

+

-

-

Y. enterocolitica subsp. enterocolitica

ATCC 9610

+

-

-

Yersinia enterocolitica subsp. Palearctica

DSMZ 13030

+

-

-

Yersinia kristensenii

ATCC 33638

+

-

-

Yersinia pestis

EV76

+

-

-

Yersinia pseudotuberculosis

ATCC 29833

+

-

-

Yersinia ruckeri

ATCC 29473

+

-

-

Yersinia frederiksenii

ATCC 33641

+

-

-

Yersinia bercovieri

ATCC 43970

+

-

-

Yersinia rohdei

ATCC 43380

+

-

-

Yersinia mollaretii

ATCC 43969

+

-

-

Yersinia aldovae

ATCC 35236

+

-

-

Yersinia intermedia

ATCC 29909

+

-

-

  1. Abbreviations used in Table 2:
  2. ATCC: American Type Culture Collection; DSMZ: German Type culture collection; HR: General Hospital of Regen; NCTC: National Collection of Type Cultures, London; PI: Pettenkofer Institute for Medical Microbiology, Munich; LMG: Culture collection of the "Laboratorium voor Microbiologie", University Gent