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Table 2 Conserved VirR regulon

From: Comparative genomics of VirR regulons in Clostridium perfringens strains

Product Genomes REF
  ATCC13124 Str.13 SM101 F4969† JGS1721† JGS1495† JGS1987† ATCC3626†  
α -clostripain CPF_0840 CPE0846 CPR_0833 AC5_0918 CJD_0991 CPC_0878 AC3_1028 AC1_0991 [7]
ccp 1.52 1.52 1.52 1.52 1.52 1.52 1.52 1.52  
Reg. RNA CPF_1204 CPE0957   AC5_1228 CJD_1316 CPC_1202 AC3_1326 AC1_1388 "
vrr 1.31 1.31   1.31 1.21 1.31 1.31 1.31  
Perfringolysin O CPF_0156 CPE0163   AC5_0210 CJD_0196 CPC_0186 AC3_0278 AC1_0175 "
pfoA 1.18 1.18   1.18 1.18 1.18 1.18 1.18  
Reg. RNA CPF_0925 CPE0920   * CJD_1073 * AC3_1102 AC1_1131 "
virU 1.20 1.20   1.26 1.26 1.20 1.20 1.20  
hypothetical CPF_1074   CPR_0937 **    ** ** [8]
  0.88   1.11 1.03    1.03 1.03  
hypothetical CPF_0461   CPR_0762      AC1_0537 "
  1.28   1.38      1.28  
hypothetical     AC5_0209   CPC_0185    
     1.18   1.18    
Reg. RNA   CPE0845       AC1_0990 [7]
virT   1.2977       1.29  
  1. Predicted VirR regulons, only genes present in at least two genomes are shown. Numbers below each gene name correspond to the score calculated as described in Methods (on a maximum attainable score of 1.52). As described in the text, most of the known VirR targets belongs to this group. * no open reading frame identified in this region but DNA sequence identical to CPE0920; ** no open reading frame identified in this region but DNA sequence identical to CPF_1074, : draft genomes.