Skip to main content

Table 1 Strains used in this study

From: Frequency and diversity of small cryptic plasmids in the genus Rahnella

Straina Genomic G+C contentb Plasmid Source Year of
isolation
Geographic region Reference
DSM 4594Tc 51.7 ± 0.5 pHW4594 Water Before 1976 France [60]
DSM 30076 51.4 ± 0.4 pHW30076 Chicken 1984 - 1988 Not given [8]
DSM 30078   - Minced meat 1984 - 1988 Not given [8]
CCUG 21213d   - Human burn 1984 - 1988 USA [8]
CCUG 48021e   - Snail, intestinal content 1984 - 1988 Germany [8]
CCUG 48023f   - Human blood 1984 - 1988 Germany [8]
WMR15 51.9 ± 0.9g pHW15 Pear, fruit 2000 Austria [6]
WMR39   - Carrot, root 2002 Austria This study
WMR41   - Carrot, root 2002 Austria This study
WMR42 51.5 ± 0.2 pHW42 Carrot, root 2002 Spain This study
WMR52   - Carrot, root 2002 Austria This study
WMR58 51.8 ± 0.7g - Carrot, root 2002 Austria [6]
WMR59   - Leek, root 2002 Austria This study
WMR60   - Leek, root 2002 Austria This study
WMR65   - Spring onion, root 2002 Austria This study
WMR66 51.8 ± 0.6 pHW66 Spring onion, root 2002 Austria This study
WMR67   - Celery, root 2002 Austria This study
WMR70   - Celery, root 2002 Austria This study
WMR75   - Sugar beet, root 2002 Austria, Lower Austria This study
WMR76   - Sugar beet, root 2002 Austria, Lower Austria This study
WMR77   - Yellow carrot, root 2002 Austria This study
WMR79   - Yellow carrot, root 2002 Austria This study
WMR81   - Yellow carrot, root 2002 Austria This study
WMR82   - Parsley, root 2002 Austria This study
WMR83   - Parsley, root 2002 Austria This study
WMR84   - Beetroot, root 2002 Austria This study
WMR86   - Beetroot, root 2002 Austria This study
WMR87   - Horseradish, root 2002 Austria This study
WMR88   - Horseradish, root 2002 Austria This study
WMR93   - Radish, root 2002 Austria This study
WMR94   - Carrot, root 2002 Spain, Gran Canaria This study
WMR95   - Carrot, root 2002 Spain, Gran Canaria This study
WMR97   - Carrot, root 2002 Spain, Gran Canaria This study
WMR98   - Carrot, root 2002 Spain, Gran Canaria This study
WMR100   - Celery, root 2003 Germany This study
WMR102   - Carrot, root 2003 Germany This study
WMR104 52.2 ± 0.3 pHW104 Carrot, root 2003 Germany This study
WMR105   - Carrot, root 2003 Germany This study
WMR106   - Carrot, root 2003 Italy This study
WMR107   - Carrot, root 2003 Italy This study
WMR108   - Carrot, root 2003 Italy This study
WMR109   - Potato, tuber 2003 Egypt This study
WMR113   - Leek, root 2003 Belgium This study
WMR114 51.3 ± 0.2 pHW114A+B Leek, root 2003 Belgium This study
WMR120 52.6 ± 0.5 pHW120 Carrot, root 2005 Spain, Tenerife This study
WMR121 52.5 ± 0.5 pHW121 Carrot, root 2005 Spain, Tenerife This study
WMR126 52.2 ± 0.1 pHW126 Carrot, root 2006 Albania This study
WMR128   - Carrot, root 2006 Croatia, Dubrovnik This study
WMR138   - Carrot, root 2006 Spain, La Palma This study
WMR140   - Carrot, root 2006 Spain, La Palma This study
WMR141   - Carrot, root 2007 Portugal, Madeira This study
WMR143   - Carrot, root 2007 Portugal, Madeira This study
WMR144   - Carrot, root 2007 Portugal, Madeira This study
  1. a DSM strains were obtained from the Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH, Germany. CCUG strains were obtained from the Culture Collection, University Göteborg, Sweden.
  2. b Means and standard deviations of the mol% G+C contents were calculated from at least three independent measurements.
  3. c Synonyms: CCUG 14185T, ATCC 33071T, CUETM 77-115T, MCCM 01700T, CDC 1327-79T.
  4. d Synonyms: CDC 658-79, MCCM 01948.
  5. e Synonyms: SM S7/1-576, CDC 4402-96.
  6. f Synonyms: SM Bonn 7, CDC 4418-96.
  7. g Taken from [6].