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Table 3 Primers used in the present study

From: Rapid Leptospira identification by direct sequencing of the diagnostic PCR products in New Caledonia

Name

Sequence

References

Target gene (amplicon size)

Annealing temperature (°C)

lfb1-F

CATTCATGTTTCGAATCATTTCAAA

[15]

lfb1 (331 bp)

60

lfb1-R

GGCCCAAGTTCCTTCTAAAAG

   

secY-F

ATGCCGATCATTTTTGCTTC

[18]

secY (549 bp)

60

secY-R

AGTTGAGCCCGCAGTTTTC

   

SecYIVF

GCGATTCAGTTTAATCCTGC

[9]

secY (202 bp)

54

SecYIV

GAGTTAGAGCTCAAATCTAAG

   

pfkB-F

CCGAAGATAAGGGGCATACC

[20]

pfkB (559 bp)

52

pfkB-R

CAAGCTAAAACCGTGAGTGATT

   

pntA-F

TGCCGATCCTACAACATTA

 

pntA (637 bp)

52

pntA-R

AAGAAGCAAGATCCACAACTAC

   

sucA-F

AGAAGAGGCCGGTTATCATCAG

 

sucA (559 bp)

52

sucA-R

CTTCCGGGTCGTCTCCATTTA

   

tpiA-F

AAGCCGTTTTCCTAGCACATTC

 

tpiA (554 bp)

52

tpiA-R

AGGCGCCTACAAAAAGACCAGA

   

mreA-F

GTAAAAGCGGCCAACCTAACAC

 

mreA (601 bp)

45

mreA-R

ACGATCCCAGACGCAAGTAA

   

glmU-F

GGAAGGGCACCCGTATGAA

 

glmU (556 bp)

50

glmU-R

TCCCTGAGCGTTTTGATTT

   

fadD-F

AGTATGCGTATCTTCCTCCTT

 

fadD (576 bp)

50

fadD-R

TTCCCACTGTAATTTCTCCTAA