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Table 1 Bacterial strains and plasmids used in this study

From: Decrypting the H-NS-dependent regulatory cascade of acid stress resistance in Escherichia coli

Strain or plasmid Genotype or description Reference or source
Strains   
JD21162 KP7600 (F- lacIQ lacZdeltaM15 galK2 galT22 lambda- in (rrnD-rrnE)1, W3110 derivative) ydeP ::Km [19]
JD24946 KP7600 (F- lacIQ lacZdeltaM15 galK2 galT22 lambda- in (rrnD-rrnE)1, W3110 derivative) yhiM ::Km [19]
JD25275 KP7600 (F- lacIQ lacZdeltaM15 galK2 galT22 lambda- in (rrnD-rrnE)1, W3110 derivative) hdeA ::Km [19]
JD26576 KP7600 (F- lacIQ lacZdeltaM15 galK2 galT22 lambda- in (rrnD-rrnE)1, W3110 derivative) ydeO::Km [19]
JD27509 KP7600 (F- lacIQ lacZdeltaM15 galK2 galT22 lambda- in (rrnD-rrnE)1, W3110 derivative) dps ::Km [19]
JW5594 BW25113 (rrnB ΔlacZ4787 HsdR514 Δ(araBAD)567 Δ(rhaBAD)568 rph-1) ΔaslB ::Km [18]
JW2366 BW25113 (rrnB ΔlacZ4787 HsdR514 Δ(araBAD)567 Δ(rhaBAD)568 rph-1) ΔevgA ::Km [18]
EP247 W3110 cadC1::Tn10 [41]
FB8 Wild type [42]
BE1411 FB8 hns::Sm [43]
BE2823 FB8 hns::Sm ΔrcsB ::Km [6]
BE2825 FB8 hns::Sm ΔhdfR ::Tet This study
BE2826 FB8 hns::Sm dps ::Km FB8 hns::Sm × P1 JD27509
BE2827 FB8 hns::Sm rpoS 359 ::Km This study
BE2828 FB8 hns::Sm yhiM ::Km FB8 hns::Sm × P1 JD24946
BE2829 FB8 hns::Sm ΔevgA ::Km FB8 hns::Sm × P1 JW2366
BE2830 FB8 hns::Sm ΔaslB ::Km FB8 hns::Sm × P1 JW3772
BE2831 FB8 hns::Sm ydeP ::Km FB8 hns::Sm × P1 JD21162
BE2832 FB8 hns::Sm ydeO ::Km FB8 hns::Sm × P1 JD26576
BE2836 FB8 hns::Sm ΔhdeA ::Km FB8 hns::Sm × P1 JD25275
BE2837 FB8 hns::Sm ΔadiY ::Tet This study
BE2939 FB8 hns::Sm cadC1::Tn10 FB8 hns::Sm × P1 EP247
Plasmids   
pDIA640 pet22b ::hdfR with C terminal His tag This study
pDIA642 pet16b ::rcsB D56E with N terminal His tag [6]
pDIA645 pet22b ::gadE with C terminal His tag [6]
pDIA646 pet16b ::adiY with N terminal strep tag This study