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Table 1 The distribution and similaritya of mycobacterial rhomboids

From: Rhomboid homologs in mycobacteria: insights from phylogeny and genomic analysis

  Orthologs of Rv0110(rhomboid protease 1)
    Query: Rv0110 Query: Rv1337
Species/strain Rhomboid Length %Identity E-value %Identity E-value
bH37Rv Rv0110 284 100 5e-143 26 3e-06
cBCG Tokyo JTY_0114 284 100 3e-143 26 3e-06
M. bovis Mb0114 284 100 3e-143 26 3e-06
M.ulcerans MUL_4822 254 78 5e-104 27 1e-04
M. marinum MMAR_0300 289 77 1e-103 26 2e-06
dM.sp. JLS Mjls_5529 289 67 7e-97 NS 5e-06
eM.sp. Kms Mkms_5237 289 66 2e-96 NS 3e-06
M. smegmatis MSMEG_5036 250 64 8e-90 NS 7e-09
M. vanbaalenii Mvan_5753 290 61 6e-77 NS 6e-08
M. gilvum Mflv_1071 279 61 7e-73 NS 2e-06
M. abscessus MAB_0026 287 38 7e-38 NS 1e-04
  Orthologs of Rv1337 (rhomboid protease 2)
H37Rv Rv1337 240 27 7e-06 100 7e-137
BCG Tokyo JTY_1373 240 27 7e-06 100 7e-137
M. bovis Mb1372 240 27 7e-06 100 7e-137
M. marinum MMAR_4059 222 26 8e-07 83 2e-106
M. avium MAV_1554 223 28 9e-05 75 7e-95
M. leprae ML1171 238 27 1e-04 73 7e-94
fMAP MAP2425c 223 NS 1e-04 74 6e-91
M. smegmatis MSMEG_4904 219 NS 1e-05 73 9e-89
M.sp. JLS Mjls_3833 229 26 1e-04 67 7e-81
M.sp. Kms Mkms_3921 229 26 1e-04 67 7e-81
M. vanbaalenii Mvan_4290 225 NS 4e-05 67 9e-77
M. gilvum Mflv_2355 225 27 7e-04 66 9e-68
M. abscessus MAB_1481 225 NS 8e-05 61 4e-67
  1. a: In comparison to Rv0110 and Rv1337 of M. tuberculosis H37Rv; lengths refer to number of amino acids
  2. b: Mycobacterium tuberculosis
  3. c: Mycobacterium bovis
  4. d: Mycobacterium species Jls
  5. e: Mycobacterium species Kms
  6. f: Mycobacterium avium subspecies Paratuberculosis
  7. : Species with one rhomboid
  8. NS: Not Significant (< 10% identity).