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Table 3 Bacterial strains and plasmids used in this study

From: Involvement of EupR, a response regulator of the NarL/FixJ family, in the control of the uptake of the compatible solutes ectoines by the halophilic bacterium Chromohalobacter salexigens

Strain or plasmid

Relevant genotype and/or description

Source or reference

C. salexigens strains

  

   DSM 3043T

Wild type

[19]

   CHR61

Spontaneous Rfr mutant of C. salexigens DSM 3043

[21]

   CHR95

CHR61 ΔeupRmntR::Tn1732; Rfr Kmr

This study

   CHR161

CHR61 mntR::Ω; Rfr Smr Spcr

This study

   CHR183

CHR61 eupR::Ω; Rfr Gnr

This study

E. coli strain

  

   DH5α

supE44 Δ(lac)U169 ϕ80dlacZ ΔM15 hsdR17 recA1 endA1 gyrA96 thi-1 relA1; host for DNA manipulations

[65]

Plasmids

  

   pKS(-)

Cloning vector; Apr

Stratagene

   pHP45Ω

pBR322 derivative carrying the Ω cassette; Apr Smr Spr

[50]

   pHP45Ωaac

pBR322 derivative carrying the Ωaac cassette; Apr Gmr Gnr

[51]

   pRK600

Helper plasmid; Cmr tra

[66]

   pJQ200-SK

Suicide vector; Gmr mob sac

[52]

   pSUP102-Gm::Tn1732

Mutagenesis plasmid carrying Tn1732; Cmr Kmr Gmr

[40, 49]

   pRR1

pKS derivative carrying a 20.8-kb sac I fragment from CHR95 including Tn1732; Apr Kmr

This study

   pMntREupR

3-kb Xba I-Apa I fragment from C. salexigens genome (containing orf1, eupR, mntR, orf4) cloned into pKS; Apr

This study

   pHpaIMntr

pMntREupR derivative containing a Hpa I recognition site within mntR; Apr

This study

   pHindIIIEupR

pMntREupR derivative containing a Hin dIII recognition site within eupR; Apr

This study

   PΩMntR

pHpaIMntr derivative with Ω cassette within mntR; Apr Smr Spr

This study

   pΩEupR

pHindIIIEupR derivative with Ωaac cassette within eupR; Apr Gnr Gmr

This study

   pJQMntR

5-kb Xba I-Apa I fragment from pΩMntR (containing orf1, eupR, mntR::Ω, orf4) cloned into pJQ200-SK; Gmr Smr Spr

This study

   pJQEupR

5-kb Xba I-Apa I fragment from pΩEupR (containing orf1, eupR::Ωaac, mntR, orf4) cloned into pJQ200-SK; Gmr Gnr

This study