From: The core genome of the anaerobic oral pathogenic bacterium Porphyromonas gingivalis
Variable region | Location | Gene content of the region |
---|---|---|
Region 1 | PG0109-PG0118 | |
Region 2 | PG0814-PG0875 | Potential pathogenicity island [28]. Many DNA mobilization proteins |
Region 3 | PG1435-PG1533 | Potential pathogenicity island [28]. Many transposon related genes. |
Region 4 | PG0185-PG0187 | Virulence associated ragA-ragB locus [46] highly variable in strains other than W83 and ATCC49417 |
Region 5 | PG0456-PG0461 | PHP domain protein, transposases |
Region 6 | PG0542-PG0546 | transcriptional regulator, type 1 restriction modification gene |
Region 7 | PG0741-PG0742 | PgaA and hypothetical protein |
Region 8 | PG1107-PG1113 | Integrase/mobilization, hypothetical proteins |
Region 9 | PG1200-PG1206 | Transcriptional regulator, DNA binding protein, hypothetical proteins |
Region 10 | PG2134-PG2136 | Lipoproteins, hypothetical proteins |