Organism | Autotrophy status | Phyogenetic classification -proteo-bacteria | No. copies cbbR | Presence of cso genes? | trpE/G associated with cbb? | cbb gene cluster associated with cbbP? | No. cbb gene clusters |
---|---|---|---|---|---|---|---|
Acidithiobacillus ferrooxidans ATCC 23270 and ATCC 53993 | obligate | Gamma- | 2 | Yes | Yes | No | 5* |
Acidithiobacillus thiooxidans ATCC 19377 | obligate | Gamma- | 2 | Yes | Yes | No | 5 |
Acidithiobacillus caldus ATCC 51756 | obligate | Gamma- | 2 | Yes | Yes | No | 5 |
Nitrosomonas europaea ATCC 19718 | obligate | Beta- | 1 | No | Yes | No | 4 |
Nitrosomonas eutropha C71 | obligate | Beta- | 1 | Yes | Yes | No | 4 |
Nitrosococcus oceani ATCC 19707 | obligate | Beta- | 1 | No | Yes | No | 4 |
Thiomicrospira crunogena XCL-2 | obligate | Gamma- | 3 | Yes | Yes | No | 5 |
5 Hydrogenovibrio marinus MH-110 | obligate | Gamma- | 2 | Yes | N/D | N/D | 3 |
Thiobacillus denitrificans ATCC 25259 | obligate | Beta- | 2 | Yes | Yes | No | 5 |
Nitrosospira multiformis ATCC 25196 | obligate | Beta- | 1 | No | Yes | No | 4 |
Methylococcus capsulatus Bath | obligate methanotroph | Gamma- | 1 | No | Yes | Yes | 3 |
1Nitrobacter hamburgensis X14 | facultative | Alpha- | 3 | Yes | No | Yes | 3 |
Nitrobacter winogradskyi Nb-255 | facultative | Alpha- | 3 | Yes | No | Yes | 3 |
Halorhodospira halophila SL1 | facultative | Gamma- | 1 | No | Yes3 | Yes | 2 |
Alkalilimnicola ehrlichii MLHE-1 | facultative | Gamma- | 1 | No | Yes3 | Yes | 2 |
Bradyrhizobium sp. BTAi1 | facultative | Alpha- | 2 | Yes | No | Yes | 3 |
Bradyrhizobium japonicum USDA 110 | facultative | Alpha- | 1 | No | No | Yes | 1 |
Ralstonia eutropha H16 | facultative | Beta- | 1 | No | No | Yes | 24 |
Dechloromonas aromatica RCB | facultative | Alpha- | 1 | No | No | Yes | 2 |
2 Magnetospirillum magneticum AMB-1 | facultative | Alpha- | ? | No | No | Yes | 2 |
Paracoccus denitrificans PD1222 | facultative | Alpha- | 1 | No | No | Yes | 1 |
Rhodobacter sphaeroides 2.4.1 | facultative | Alpha- | 1 | No | No | Yes | 2 |
Rhodoferax ferrireducens T118 | facultative | Beta- | 1 | No | No | Yes | 1 |
Rhodopseudomonas palustris CGA009 | facultative | Alpha- | 2 | No | No | Yes | 3 |
Rhodospirillum rubrum ATCC 11170 | facultative | Alpha- | 1 | No | No | Yes | 1 |
Sinorhizobium meliloti 1021 | facultative | Alpha- | 1 | No | No | Yes | 1 |