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Table 1 Pairwise analysis of amino acid sequence alignments from TRF homologues based on bl2seq sequences (protein-protein BLAST)

From: The Leishmania amazonensis TRF (TTAGGG repeat-binding factor) homologue binds and co-localizes with telomeres

 

LaTRF (full length)

LaTRFTRFHdomain

LaTRFMybdomain

 

%Identity

%Similarity

%Identity

%Similarity

%Identity

%Similarity

LmTRF

99

99

100

100

100

100

LiTRF

88

91

85

89

98

100

LbTRF

65

71

60

70

96

100

TcTRF

45

59

38

54

63

77

TbTRF

35

53

39

59

54

66

hTRF1

Not significant

Not significant

16

25

31

54

hTRF2

Not significant

Not significant

15

30

29

55

  1. La, L. amazonensis (GenBank acc. no. EF559263); Lm, L. major (TrEMBL acc. no. Q4QDR7); Li, L. infantum (GenBank acc. no. XP_001464939.1); Lb, L. brasiliensis (GenBank acc. no. XP_001564056.1); Tc, Trypanosoma cruzi (GenBank acc. no. XP_819954.1); Tb, Trypanosoma brucei (GenBank acc. no. AY910010); h, human (hTRF1 GenBank Acc. no. P54274.2; hTRF2 GenBank acc. no. Q15554).
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BMC Microbiology

ISSN: 1471-2180

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