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Table 1 Data summary and diversity estimates

From: The analysis of oral microbial communities of wild-type and toll-like receptor 2-deficient mice using a 454 GS FLX Titanium pyrosequencer

 

WT1

WT2

WT3

WT4

KO1

KO2

KO3

KO4

Mouse age (wk)

15

11

14

15

9

9

16

16

Housing period (wk)a

9

3

8

9

9

9

16

16

Total readsb

13054

10264

13187

11625

15745

15348

11573

12180

Number of reads analyzedc

9840

9029

9669

8590

12746

11687

8928

9557

Average length (bp)

436

466

437

432

463

432

436

437

Maximum length (bp)

525

530

512

526

527

524

518

518

Number of phylotypes

        

   observed

82

162

85

87

326

106

140

108

   Chao1 estimation

136

194

118

114

470

146

250

144

  1. a Period that mice were housed at the Laboratory Animal Facility of the School of Dentistry, Seoul National University
  2. b ≥ 100
  3. c ≥ 300 and N = 0 or 1
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BMC Microbiology

ISSN: 1471-2180

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