Table 1 Oligonucleotides used in this work.
From: Utilization of tmRNA sequences for bacterial identification
Oligonucleotide | Sequence 5'-3' * | Target tmRNA |
|---|---|---|
B1 | ggggacgttacggattcgac, 1–20 | B. subtilis |
B2 | tggagacgccgggagtcgaa, 351–360 | B. subtilis |
L3 | ttaaagccccgcaaaatgtc, 229–248 | L. lactis IL1403 |
L4 | gtcaagcctccacaacaacg, 195–214 | L. lactis IL1403 |
L11 | acggattcgacagg, 10–23 | L. lactis IL1403 |
L12 | gggagtcgaaccc, 234–246 | L. lactis IL1403 |
E1 | F-gtggaatccagaatcagcccc, 1–21 | E. coli |
E2 | F-gcgtagttttcgtc, 96–109 | E. coli |
E3 | F-ttgatccccgtcctaagagcgg, 154–175 | E. coli |
E4 | F-tctcttttgggtttgacctctc, 176–197 | E. coli |
E5 | F-tggtggagctggcgggagttgaa, 341–363 | E. coli |
RNA1 | HRP-tgggtttgacctctcttg, 173–190 | E. coli |